80. Shin HK, Hwang SA, Jeong JH, Shin SC, Oh YJ, Kim JH, Hwang IA, Kim EE*, Choo HA*, Song EJ*. Targeting USP47 enhances the efficacy of KRAS inhibitor in KRASG12C mutated non-small cell lung cancer by controlling deubiquitination of c-Myc. Pharmacol Res. 2025 Apr 1;189(12):107722. (IF 9.1)

79. Ban E, Lim HJ, Kwon H, Song EJ*. Practical magnetic bead-based capillary electrophoresis with laser-induced fluorescence for detecting endogenous miRNA in plasma. Heliyon 2023 Nov 23;9(12):e22809.

78. Shin SC, Park J, Kim KH, Yoon JM, Cho J, Ha BH, Oh Y, Choo H, Song EJ*, Kim EE*. Structural and functional characterization of USP47 reveals a hot spot for inhibitor design. Commun Biol. 2023 Sep 22;6(1):970.

77. Kim YJ, Lee Y, Shin H, Hwang S, Park J, Song EJ*. Ubiquitin-proteasome system as a target for anticancer treatment-an update. Arch Pharm Res. 2023 Jul;46(7):573-597.

76. Park J, Shin SC, Jin KS, Lim MJ, Kim Y, Kim EE*, Song EJ*. USP35 dimer prevents its degradation by E3 ligase CHIP through auto-deubiquitinating activity. Cell Mol Life Sci. 2023 Apr 1;80(4):112.

75. Jeon S, Jin H, Kim JM, Hur Y, Song EJ, Lee YJ, Na Y, Cho J, Lee YS. The miR-15b-Smurf2-HSP27 axis promotes pulmonary fibrosis. J Biomed Sci. 2023 Jan 7;30(1):2.

74. Song S, Park JK, Shin SC, Lee JJ, Hong SK, Song IK, Kim B, Song EJ*, Lee KJ*, Kim EE*. The complex of Fas-associated factor 1 with Hsp70 stabilizes the adherens junction integrity by suppressing RhoA activation. J Mol Cell Biol. 2022 Nov 17;14(6):mjac037.

73. Park J, Cho M, Cho J, Kim EE, Song EJ* MicroRNA-101-3p Suppresses Cancer Cell Growth by Inhibiting the USP47-Induced Deubiquitination of RPL11. Cancers (Basel). 2022 Feb 15;14(4):964.

72. Ban E, Song EJ* Considerations and Suggestions for the Reliable Analysis of miRNA in Plasma Using qRT-PCR. Genes (Basel). 2022 Feb 10;13(2):328.

71. Das T, Lee EY, You HJ, Kim EE, Song EJ*. USP15 and USP4 facilitate lung cancer cell proliferation by regulating the alternative splicing of SRSF1. Cell Death Discovery, 2022 Jan 13;8(1):24.

70. Hyeon SJ, Park J, Yoo J, Kim SH, Hwang YJ, Kim SC, Liu T, Shim HS, Kim Y, Cho Y, Woo J, Kim KS, Myers RH, Ryu HL, Kowall NW, Song EJ, Hwang EM, Seo H, Lee J, Ryu H. Dysfunction of X-linked inhibitor of apoptosis protein (XIAP) triggers neuropathological processes via altered p53 activity in Huntington’s disease. Progress in Neurobiology, 2021 Sep;204:102110.

69. Ban E, Kwon H, Seo HS, Yoo YS, Song EJ*. Screening of miRNAs in plasma as a diagnostic biomarker for cardiac disease based on optimization of extraction and qRT-PCR condition assay through amplification efficiency. BMC Biotechnology, 2021 Aug 16;21(1):50.

68. Ban E, Kwon H, Song EJ*. Evaluation of Pharmacokinetics and Metabolism of Phosphorothioate Antisense Oligonucleotide G3139 in Rat by Capillary Electrophoresis with Laser-Induced Fluorescence. Nucleic Acid Therapeutics, 2021 Aug;31(4):316-320.

67. Subramanian M, Hyeon SJ, Das T, Suh YS, Kim YK, Lee JS, Song EJ*, Ryu H*, Yu K*. UBE4B, a microRNA-9 target gene, promotes autophagy-mediated Tau degradation. Nature Communications, 2021, 12, 3291 (IF 12.121)

66. Das T, Song EJ*, Kim EE*. The Multifaceted Roles of USP15 in Signal Transduction. Int J Mol Sci. 2021 Apr 29;22(9):4728 (F 4.556)

65. Park J, Cho J, Song EJ*. Ubiquitin-proteasome system (UPS) as a target for anticancer treatment. Arch Pharm Res. 2020 Nov;43(11):1144-1161.

64. Cho J, Park J, Kim EE, Song EJ*. Assay Systems for Profiling Deubiquitinating Activity. Int J Mol Sci. 2020 Aug 6;21(16):E5638. (IF 4.556)

63. Das T, Shin SC, Song EJ, Kim EE. Regulation of Deubiquitinating Enzymes by Post-Translational Modifications. Int J Mol Sci. 2020 Jun 4;21(11):E4028. (IF 4.556)

62. Ban E, Kwon H, Song EJ* A rapid and reliable CE-LIF method for the quantitative analysis of miRNA-497 in plasma and organs and its application to a pharmacokinetic and biodistribution study. RSC Adv., 2020,10, 18648-18654 (IF 3.119)

61. Cho J, Park J, Shin SC, Jang M, Kim JH, Kim EE*, Song EJ* USP47 Promotes Tumorigenesis by Negative Regulation of p53 through Deubiquitinating Ribosomal Protein S2. Cancers (Basel). 2020 May 1;12(5):E1137. (IF 6.126)

60. Cho J, Park J, Shin SC, Kim JH, Kim EE, Song EJ* Ribosomal protein S2 interplays with MDM2 to induce p53. Biochem Biophys Res Commun. 2020 Mar 5;523(2):542-547. (IF 2.985)

59. Ban E, Jeong S, Park M, Kwon H, Park J, Song EJ*, Kim A*. Accelerated wound healing in diabetic mice by miRNA-497 and its anti-inflammatory activity. Biomed Pharmacother. 2020 Jan;121:109613. (IF 4.545)

58. Park J, Cho J, Kim EE, Song EJ* Deubiquitinating Enzymes: A Critical Regulator of Mitosis. Int J Mol Sci. 2019 Nov 28;20(23):5997. (IF 4.556)

57. Chae DK, Park J, Cho M, Ban E, Jang M, Yoo YS, Kim EE, Baik JH, Song EJ*. MiR-195 and miR-497 suppress tumorigenesis in lung cancer by inhibiting SMURF2-induced TGF-β receptor Ⅰ ubiquitination, Molecular Oncology 2019 Dec;13(12):2663-2678 (IF 6.574)

56. Kim DH, Ahn JS, Han HJ, Kim HM, Hwang J, Lee KH, Cha-Molstad H, Ryoo IJ, Jang JH, Ko SK, Yang JO, Lee HG, Lee S, Song EJ, Kim JY, Huh YH, Kwon YT, Soung NK, Kim BY. Cep131 overexpression promotes centrosome amplification and colon cancer progression by regulating Plk4 stability. Cell Death Dis. 2019 Jul 29;10(8):570. (IF 6.304)

55. Das T, Kim EE*, Song EJ*. Phosphorylation of USP15 and USP4 Regulates Localization and Spliceosomal Deubiquitination. J Mol Biol. 2019 Jul 19. pii: S0022-2836(19)30454-1 (IF 5.067)

54. Park J, Kwon MS, Kim EE, Lee H, Song EJ*. USP35 Regulates Mitotic Progression by Modulating the Stability of Aurora B. Nature Communications 2018 Feb 15;9(1):688 (if 12.353)

53. Park J, Song EJ*. Deubiquitinase USP35 as a novel mitotic regulator via maintenance of Aurora B stability. BMB Rep. 2018 Jun;51(6):261-262. (IF 3.085)

52. Ban E, Chae DK, Yoo YS, Song EJ*. An improvement of miRNA extraction efficiency in human plasma. Anal Bioanal Chem. 2017 Nov;409(27):6397-6404. (IF 3.307)

51. Chae DK, Ban E, Yoo YS, Kim EE, Baik JH, Song EJ*. MIR-27a regulates the TGF-β signaling pathway by targeting SMAD2 and SMAD4 in lung cancer. Mol Carcinog. 2017 Aug;56(8):1992-1998. (IF 3.851)

50. Das T, Park JK, Park J, Kim E, Rape M, Kim EE*, Song EJ*. USP15 regulates dynamic protein-protein interactions of the spliceosome through deubiquitination of PRP31. Nucleic Acids Res. 2017 May 5;45(8):4866-4880 (IF 11.561)

49. Hong SK, Kim KH, Song EJ, Kim EE. Structural Basis for the Interaction between the IUS-SPRY Domain of RanBPM and DDX-4 in Germ Cell Development. J Mol Biol. 2016 Oct 23;428(21):4330-4344. (IF 4.894)

48. Chae DK, Ban E, Yoo YS, Baik JH, Song EJ*. Evaluation of inhibition of miRNA expression induced by anti-miRNA oligonucleotides. Anal Bioanal Chem. 2016 Jul;408(18):4829-33 (IF 3.307)

47. Park JK, Das T, Song EJ*, Kim EE*. (co-correspondence) Structural basis for recruiting and shuttling of the spliceosomal deubiquitinase USP4 by SART3. Nucleic Acids Res. 2016 Jun 20;44(11):5424-37 (IF 11.561)

46. Lee H, Park J, Kim EE, Yoo YS, Song EJ*. Proteasome inhibitors attenuated cholesterol-induced cardiac hypertrophy in H9c2 cells. BMB Rep. 2016 May;49(5):270-5 (IF 3.085)

45. Ban E, Yoo YS, Song EJ*. Analysis and applications of nanoparticles in capillary electrophoresis. Talanta. 2015 Aug 15;141:15-20 (IF 4.244)

44. Akter H, Park M, Kwon OS, Song EJ, Park WS, Kang MJ Activation of matrix metalloproteinase-9 (MMP-9) by neurotensin promotes cell invasion and migration through ERK pathway in gastric cancer. Tumour Biol. 2015 Aug;36(8):6053-62 (IF 3.650)

43. Ban E, Song EJ*. Capillary electrophoresis methods for microRNAs assays: a review. Anal Chim Acta. 2014 Dec 10;852:1-7. (IF 5.123)

42. Lee H, Ban E, Kim EE, Yoo YS, Lee D, Song EJ*. Quantitative analysis of a ubiquitin-dependent substrate using capillary electrophoresis with dual laser-induced fluorescence. Electrophoresis. 2014 Oct;35(20):2978-85. (2.569)

41. Kim SJ1, Cho J, Song EJ, Kim SJ, Kim HM, Lee KE, Suh SW, Kim EE. Structural Basis for Ovarian Tumor Domain-containing Protein 1 (OTU1) Binding to p97/Valosin-containing Protein (VCP). J Biol Chem. 2014 May 2;289(18):12264-74. (IF 4.01)

40. Ban E, Chae DK, Song EJ.* Simultaneous detection of multiple microRNAs for expression profiles of microRNAs in lung cancer cell lines by capillary electrophoresis with dual laser-induced fluorescence. J Chromatogr A. 2013 Nov 8;1315:195-9.

39. Lee H, Yoo YS, Lee D, Song EJ*. Cholesterol induces cardiac hypertrophy by activating the AKT pathway. J. Steroid Biochem. Mol. Biol.2013 Jul 29;138C:307-313.

38. Ban E, Chae DK, Song EJ*. Enhanced extraction efficiency of miRNA from cells by addition of Triton X-100. Anal. Bioanal Chem. 2013 Sep;405(23):7535-9.

37. Ban E, Song EJ.* Recent developments and applications of capillary electrophoresis with laser-induced fluorescence detection in biological samples. J Chromatogr B Analyt Technol Biomed Life Sci. 2013 929:180-186.

36. Ban E., Chae D.K. and Song E.J.* Determination of miRNA in cardiomyoblast cells using capillary electrophoresis with laser induced fluorescence detection. Electrophoresis 2013, 34(4):598-604

35. Das T, Yoo YS, Rhim H, Song EJ.* Potential role of Hsp25 in calcium-modulated cardiomyocytes. Proteomics 2012 Feb;12(3):411-20

34. Ban E., Park S.H., Kang M.J., Lee H.J., Song E.J.^*, and Yoo Y.S.^* (co-correspondence) Growing trend of CE at the omics level: the frontier of systems biology-an update Electrophoresis  2012 Jan;33(1):2-13.

33. Park S.H., Ban E., Song E.J., Lee H., Chung D.S., Yoo Y.S. Capillary electrophoretic mobility shift assay for binding of DNA with NFAT3, a transcription factor from H9c2 cardiac myoblast cells. Electrophoresis  2011, 32(16), 2174-2180 (IF 3.569)

32.Song E.J., and Yoo Y.S. Nerve growth factor-induced neurite outgrowth is potentiated by stabilization of TrkA receptors. BMB reports 2011 Mar;44(3):182-6.

31. Hong H.M., Song E.J. ^*, Oh E., Kabir M.H., Lee C., Yoo Y.S. (equally contribute)  Endothelin-1- and isoproterenol-induced differential protein expression and signaling pathway in HL-1 cardiomyocytes. Proteomics.2011 Jan;11(2):283-97.

30. Hasan M.N., Park S.H., Oh E., Song E.J., Ban E.M., Yoo Y.S. Sensitivity enhancement of CE and CE-MS for the analysis of peptides by a dynamic pH junction. J. Sep. Sci., 2010 Dec;33(23-24):3701-9.

29. Song E.J., Werner S.L., Neubauer J., Stegmeier F,. Aspden J., Rio D., Harper J.W., Elledge S.J., Kirschner M.W., Rape M. The Prp19 complex and the Usp4^Sart3deubiquitinating enzyme control reversible ubiquitination at the spliceosome. Genes Dev.2010, 24(13):1434-1447.

28. Oh E., Hasan M.N., Jamshed M., Park S.H., Hong H.M., Song E.J., Yoo Y.S. Growing trend of CE at the omics level: the frontier of systems biology. Electrophoresis. 2010, 31(1):74-92.

27. Lee E, Jeong J, Kim SE, Song EJ, Kang SW, Lee KJ. Multiple functions of Nm23-H1 are regulated by oxido-reduction system. PLoS One. 2009, 4(11):e7949.

26. Hwang N.R., Yim S.H., Kim Y.M., Jeong J., Song E.J,. Lee Y., Lee J.H., Choi S., Lee K.J. Oxidative modifications of glyceraldehyde-3-phosphate dehydrogenase play a key role in its multiple cellular functions Biochem. J. 2009, 423(2):253-264.

25. Song E.J.Hong H.M. Yoo Y.S. Proteasome inhibition induces neurite outgrowth through posttranslational modification of TrkA receptor. Int. J. Biochem. Cell. Biol.2009, 41(3):539-545

24. Suresh Babu C.V., Babar S.M., Song E.J., Oh E, and Yoo Y.S.  Kinetic analysis of the MAPK and PI3K/Akt signaling pathways. Mol. Cells. 2008, 25(3):397-406.

23. Babar S.M., Song E.J., and Yoo Y.S. Analysis of calcineurin activity by capillary electrophoresis with laser-induced fluorescence detection using peptide substrate. J. Sep. Sci. 2008, 31(3):579-587.

22. Song E.J., Babar S.M., Oh, E., Hasan M.N., Hong H.M., and Yoo Y.S. CE at the omics level: Towards systems biology – An update. Electrophoresis, 2008, 29(1):129-142.

21. Suresh Babu C.V., Song E.J., Babar S.M., and Yoo Y.S.  Measurement of phosphorylated phospholamban levels in cardiomyocytes (HL-1) by immunoprecipitation. J. Biochem. Biophys. Methods, 2008, 70(6):838-844.

20. Suresh Babu C.V., Song E.J., Babar S.M., and Yoo Y.S.  Capillary electrophoresis of signaling molecules. Biomed. Chromatogr. 2007, 21(9):890-897

19. Babar S.M., Song E.J., Hasan M.N., and Yoo Y.S. Experimental design optimization of the capillary electrophoresis separation of leucin enkephalin and its immune complex. J. Sep. Sci. 2007, 30(14):2311-2319.

18. Kim Y.M., Song E.J., Seo J.W., Kim H.J., Lee K.J. Proteomic Analysis of Tyrosine Phosphorylations in Vascular Endothelial Growth Factor- and Reactive Oxygen Species-Mediated Signaling Pathway. J. Proteome Res. 2007, 6(2):593-601

17. Babu S.C.V., Song E.J., and Yoo Y.S. Modeling and simulation in signal transduction pathways: a systems biology approach. Biochimie2006, 88(3-4):277-283.

16. Babu S.C.V.^*, Song E.J. ^*, Babar S.M.E., Wi M., and Yoo Y.S. (equally contribute) Capillary electrophoresis at omics level : towards systems biology. Electrophoresis2006 Jan;27(1):97-110.

15. Kim S.Y., Song E.J., Lee K.J., and Ferrell JE Jr. Multisite M-phase phosphorylation of Xenopus Wee1A.  Mol. Cell. Biol. 2005, 25(23):10580-10590.

14. Lee S., Kim E., Song E.J. and Park M. A New Immunotronic Approach to Hardware Fault Detection Using Symbiotic Evolution. IWINAC 2005 (LNCS 3562), 2005, 133–142,

13. Song E.J., Lim S.H., Kim E., Kim N.S., and Lee K.J. Human Fas Associated Factor 1 Interactions with Ubiquitinated Proteins and Valosin-containing Protein, are involved in Ubiquitin-Proteasome Pathway. Mol. Cell. Biol. 2005, 25(6):2511-2524.

12. Kim H.J. ^*, Song E.J.^*, Lee Y.S., Kim E., and Lee K.J. (equally contribute) Human fas-associated factor1 interacts with heat shock protein70 and negatively regulates chaperone activity. J. Biol. Chem. 2005, 280(9):8125-8133.

11. Ju B.G., Solum D., Song E.J. , Lee K.J. , Rose D.W., Glass C.K., and Rosenfeld M.G.. Activating the PARP-1 Sensor Component of the Groucho/ TLE1 Corepressor Complex Mediates a CaMKinase IIdelta-Dependent Neurogenic Gene Activation Pathway. Cell 2004, 119(6):815-829.

10. Kim Y.M., Kim H.J., Song E.J., and Lee K.J. Glucuronic acid is a novel inducer of heat shock response. Mol. Cell. Biochem.2004, 259(1-2):23-33.

9. Joeng K.S., Song E.J., Lee K.J., and Lee J. Long lifespan in worms with long telomeric DNA. Nat. Genet. 2004, 36(6):607-611.

8. Goo Y.H., Sohn Y.C., Kim D.H., Kim S.W., Kang M.J., Jung D.J., Kwak E., Barlev N.A., Berger S.L., Chow V.T., Roeder R.G., Azorsa D.O., Meltzer P.S., Suh P.G., Song E.J., Lee K.J., Lee Y.C., and Lee J.W. Activating signal cointegrator 2 belongs to a novel steady-state complex that contains a subset of trithorax group proteins. Mol. Cell. Biol. 2003, 23(1):140-149.

7. Jeong J.W., Bae M.K., Ahn M.Y., Kim S.H., Sohn T.K., Bae M.H., Yoo M.A.,Song E.J., Lee K.J., and Kim K.W. Regulation and destabilization of HIF-1alpha by ARD1-mediated acetylation. Cell  2002, 111(5):709-720.

6. Gu J.Y., Park J.M., Song E.J., Mizuguchi G., Yoon J.H., Kim-Ha J., Lee K.J., and Kim Y.J. Novel Mediator proteins of the small Mediator complex in Drosophila SL2 cells. J. Biol. Chem.2002, 277(30):27154-27161.

5. Kim H.J. ^*, Song E.J.^*, and Lee K.J.(equally contribute) Proteomic analysis of protein phosphorylations in heat shock response and thermotolerance. J. Biol. Chem. 2002, 277(26):23193-23207.

4. Song E.J., and Lee K.J. Identification of proteome molecules by proteomics using two-dimensional gel electrophoresis and MALDI-TOF MS. Exp. Mol. Med.2001, 33(1 Suppl):5-18.

3. Lee S.Y., Song E.J., Kim H.J., Kang H.J., Kim J.H., and Lee K.J. Rac1 regulates heat shock responses by reorganization of vimentin filaments: identification using MALDI-TOF MS. Cell Death Differ.2001, 8(11):1093-1102.

2. Kim S.Y., Song E.J., Chang, K.H., Kim E., Chae S.K., Lee H., and Lee K.J. Oligomeric structures determine the biochemical characteristics of human nucleoside diphosphate kinases. J. Biochem. Mol. Biol. 2001, 34(4), 355-364

1. Song E.J., Kim Y.S., Chung J.Y., Kim E., Chae S.K., and Lee K.J. Oxidative modification of nucleoside diphosphate kinase and its identification by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry. Biochemistry2000, 39(33):10090-10097.